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Geoff Papilion has made a living running infrastructure for the past 15 years. He is currently employeed at Wikia.com, scaling the infrastructure to 1.5 billion request per day. Geoffrey is a DZone MVB and is not an employee of DZone and has posted 26 posts at DZone. You can read more from them at their website. View Full User Profile

Solr Upgrade Surprise and Using Kill to Debug It

07.31.2012
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At work, we’ve recently upgraded to the latest and greatest stable version of Solr (3.6), and moved from using the dismax parser to the edismax parser. The initial performance of Solr was very poor in our environment, and we removed the initial set of search features we had planned to deploy trying to get the CPU utilization in order.

Once we finally, rolled back a set of features Solr seemed to be behaving optimally. Below is what we were seeing as we looked at our search servers CPU:
Solr CPU Usage Pre and Post Fix
Throughout the day we had periods where we saw large CPU spikes, but they didn’t really seem to affect throughput or average latency of the server. None the less we suspected there was still an issue, and started looking for a root cause.
 

Kill -3 To The Rescue

 
If you’ve never used kill -3, its perhaps one of the most useful Java debugging utilities around. It tells the JVM to produce a full thread dump, which it will then print to the STDOUT of the process. I became familiar with this when trying to hunt down treads in a Tomcat container that were blocking the process from exiting. Issuing kill -3 would give you enough information to find the problematic thread, and work with development to fix it.

In this case, I was hunting for a hint as to what went wrong with our search. I issued kill -3 during a spike, and got something like this:

012-07-27_16:52:01.54871 2012-07-27 16:52:01
2012-07-27_16:52:01.54873 Full thread dump Java HotSpot(TM) 64-Bit Server VM (20.5-b03 mixed mode):
2012-07-27_16:52:01.54874
2012-07-27_16:52:01.54874 "JMX server connection timeout 1663" daemon prio=10 tid=0x0000000040dee800 nid=0x192c in Object.wait() [0x00007f1a24327000]
2012-07-27_16:52:01.54874 java.lang.Thread.State: TIMED_WAITING (on object monitor)
2012-07-27_16:52:01.54999 at java.lang.Object.wait(Native Method)
2012-07-27_16:52:01.55000 - waiting on <0x00007f7c189ff118> (a [I)
2012-07-27_16:52:01.55001 at com.sun.jmx.remote.internal.ServerCommunicatorAdmin$Timeout.run(ServerCommunicatorAdmin.java:150)
2012-07-27_16:52:01.55001 - locked <0x00007f7c189ff118> (a [I)
2012-07-27_16:52:01.55002 at java.lang.Thread.run(Thread.java:662)
2012-07-27_16:52:01.55002
...
2012-07-27_16:52:01.55458 "1565623588@qtp-1939768105-762" prio=10 tid=0x00007f7314537800 nid=0x120c runnable [0x00007f1a24c2f000]
2012-07-27_16:52:01.55459 java.lang.Thread.State: RUNNABLE
2012-07-27_16:52:01.55459 at org.apache.lucene.util.PriorityQueue.downHeap(PriorityQueue.java:239)
2012-07-27_16:52:01.55459 at org.apache.lucene.util.PriorityQueue.pop(PriorityQueue.java:176)
2012-07-27_16:52:01.55459 at org.apache.lucene.index.DirectoryReader$MultiTermEnum.next(DirectoryReader.java:1129)
2012-07-27_16:52:01.55460 at org.apache.lucene.search.FilteredTermEnum.next(FilteredTermEnum.java:77)
2012-07-27_16:52:01.55460 at org.apache.lucene.search.FilteredTermEnum.setEnum(FilteredTermEnum.java:56)
2012-07-27_16:52:01.55461 at org.apache.lucene.search.FuzzyTermEnum.<init>(FuzzyTermEnum.java:121)
2012-07-27_16:52:01.55461 at org.apache.lucene.search.FuzzyQuery.getEnum(FuzzyQuery.java:135)
2012-07-27_16:52:01.55462 at org.apache.lucene.search.MultiTermQuery$RewriteMethod.getTermsEnum(MultiTermQuery.java:74)
2012-07-27_16:52:01.55462 at org.apache.lucene.search.TermCollectingRewrite.collectTerms(TermCollectingRewrite.java:34)
2012-07-27_16:52:01.55463 at org.apache.lucene.search.TopTermsRewrite.rewrite(TopTermsRewrite.java:58)
2012-07-27_16:52:01.55463 at org.apache.lucene.search.MultiTermQuery.rewrite(MultiTermQuery.java:312)
2012-07-27_16:52:01.55463 at org.apache.lucene.search.vectorhighlight.FieldQuery.flatten(FieldQuery.java:114)
2012-07-27_16:52:01.55464 at org.apache.lucene.search.vectorhighlight.FieldQuery.flatten(FieldQuery.java:104)
2012-07-27_16:52:01.55464 at org.apache.lucene.search.vectorhighlight.FieldQuery.flatten(FieldQuery.java:98)
2012-07-27_16:52:01.55465 at org.apache.lucene.search.vectorhighlight.FieldQuery.flatten(FieldQuery.java:98)
2012-07-27_16:52:01.55465 at org.apache.lucene.search.vectorhighlight.FieldQuery.flatten(FieldQuery.java:98)
2012-07-27_16:52:01.55466 at org.apache.lucene.search.vectorhighlight.FieldQuery.<init>(FieldQuery.java:69)
2012-07-27_16:52:01.55466 at org.apache.lucene.search.vectorhighlight.FastVectorHighlighter.getFieldQuery(FastVectorHighlighter.java:97)
2012-07-27_16:52:01.55466 at org.apache.solr.highlight.DefaultSolrHighlighter.doHighlighting(DefaultSolrHighlighter.java:388)
2012-07-27_16:52:01.55467 at org.apache.solr.handler.component.HighlightComponent.process(HighlightComponent.java:131)
2012-07-27_16:52:01.55467 at org.apache.solr.handler.component.SearchHandler.handleRequestBody(SearchHandler.java:186)
2012-07-27_16:52:01.55468 at org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:129)
2012-07-27_16:52:01.55468 at org.apache.solr.core.SolrCore.execute(SolrCore.java:1376)
....

Looking at the the output, I noticed that we had a lot threads calling FuzzyTermEnum. I thought this was strange, and sounded like an expensive search method. I talked with the developer, and we expected that the tilde character was being ignored by edismax. At the very least being escaped by our library, since it was included in the characters to escape. I checked the request logs, and we had people looking for exact titles that contained ~. This turned a 300ms query into a query that timed out, due to the size of our index. Further inspection of the thread dump revealed that we were also allowing the * to be used in query terms as well. Terms like *s ended up being equally problematic.
 

A Solr Surprize

 
We hadn’t sufficiently tested edismax, and we’re surprised that it ran ~,+,^, and * when escaped. I didn’t find any documentation that stated this directly, but I didn’t really expect to. We double checked our Solr library to see if that it was properly escaping the special characters in the query, but they we’re still being processed by Solr. On a hunch we tried double escaping the characters, which resolved the issue.

I’m not sure if this is a well known problem with edismax, but if you’re seeing odd CPU spikes this is definitely worth checking for. In addition, when trying to get to a root of a tough problem kill -3 can be a great shortcut. It saved me a bunch of painful debugging, and really eliminated almost all my guess work.

 

 

 

Published at DZone with permission of Geoffrey Papilion, author and DZone MVB. (source)

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